YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2130444
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FYASNGITNV TAFTKPAYFG SSDLDQSSPL FTGVLTSPAD LPQWTSSYDL PAYPPNATVM  60
   61 GNTTSTCKVV IYQFFFRVPV SGLFTLAITN VDDVFYGWAG SKAISGWSNK NYDSYAYWHI 120
  121 TTGKTGIASF SMGSLTAGSF IPIRFVVANG AGKGGFDFDF IGPDGTSYNP TSYAYTATCT 180
  181 QIFLPFGKGN GGVDN

Type	Start	End	Confidence
Cytoplasmic	1	69	0.71
Transmembrane Helix	70	89	0.53
Non-Cytoplasmic	90	125	0.78
Transmembrane Helix	126	147	0.63
Cytoplasmic	148	195	0.61