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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14089619, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVKKITFI AIFSTLILSP MALVSCVTTK SNNQIDPSAK QNTKQTSPQS APKENNTNTN  60
   61 RNSIISPQNP DSSKTPETQV PPTKPEDQNK EPQSPKDPEI KDNGQKNEGS KAPEIKDMSQ 120
  121 KDQAPQVPQK QPEDPKKPET QKPPVKSEDQ NKEPQDPKAP EKQAETPKDP QVKDMANKNI 180
  181 QGPKVPEKQA QTPKDPEIKN MDQKDQAPQE PQKQPEASKK PETQKPPTNP ESSNTQQENK 240
  241 QPEVQKTPEK PKAPKAEEPQ NPGNTQNNAN DQGQTQEDSN VQKWWQNSGA HEVELTKISS 300
  301 DGQNLNLSFS EELPQGITAK LVFSKTDDKS GQTKEIDFST TKSKDQKINL GELRSGKYTI 360
  361 SHIIFGIALF YPNSNNTFDY TSANEDFLAT RDFLRNLDIN VKEEKKNIQQ ISHIGINDFN 420
  421 YSLIEKESNE NSKTFEFPQE ILDKNKFKQA KVKFTFKSQS EQAYNSKRSV NLDVHIDDKF 480
  481 AFTKTIEWTY LSLESIYNQF EKREQRYNEL KDLIIKKYFE NRKNTLPIEL PNYKKGLGSE 540
  541 NKELAKSTKI SLKDEIDATF KGYGILKYNN STFEENHGAS LNDKEGSAKL VFEISKGNYK 600
  601 GILIEISING FATYGDYDKD YESWQRENDF NISVSSQHRG YSANLVFKPY WWQTYYWLAS 660
  661 YSDQNPSLTF SFKDQNKDDL IYGFKLLFWK GQYYRSDSYK VEYRKTANGP WESLDISNRK 720
  721 VHEFSDNRFI EEEILIKKDQ VQAVRVTFLK DKKAHHTSVA ALMPITKKAS SNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle