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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15829164
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRKNLLTL ISTLILAPVS IVSCSLGINS KANQASEEAN KNEQINKPSK KVDSNSKDEG  60
   61 LQKQQTQQED NNSTNKIDSA KENIKANEKN DSNQTQDNQD DSKKINDKNQ SQSNQQLNNE 120
  121 NDNSVNNNKE NSSSKNDENL TLTKVRLGHW NVLNQSGNIP TKNLAISKVI LHNKLDLVGL 180
  181 TEITNENGVK TIINELNKSS SDKWNYIVSL KKRGTTGSSG QEEHVGIIYK ENKLTLESFD 240
  241 DKEKSKGKFY ENKLWDDPFK KGQKIDFVRP PFGVKFSTKG NIKNDFTVVF MHSDAPGVKE 300
  301 ERGEISAKGY SGQGHKEVAE ALRTKEVMEY FDSIDGVNNE LFFMGDTNIK LGNEAKAFEP 360
  361 LLQSGYKSLI KDVKENATSL AQRWGEYANH YDKIFYKGDL KVENSGFYDL WKVFDDNLLN 420
  421 KEEFKTKVEE YRSSKKAKDK YKGEYSYVLH AISDHTIVYT DLILLQKDDQ NKNSENKDEN 480
  481 SNDSKQNLDK PKTNNEQNQN TQDDSKKISD ASQNNSNTTN EKDQKLDSQD ESKNNAIKSQ 540
  541 QNDQKDSNLS SSKNDTQPSK ESSPQINPNL ENNQEISHSN NGENDDSKEQ NTSNSRQTKN 600
  601 DLRSEQKQNL TTKNPSSNSS NVETKNETQN NENSSTKKDE IDTSAKTQDS TNSNLKNEEK 660
  661 TNQVETKTNT ESNNSNSTNK QEENSSTKKE EISKSESNVN NSNSTNKQEE NIDNKKEEIS 720
  721 KSESNVNNSN STNTQNQETP ETNESQNNVI IGKNPNNQSL NQNAIDVSAK KVKIGYWNIN 780
  781 ESVGKSSASK AFAVAKVIDH NKLDLVGIGG LVHEETLTKI VEEMNKLSKD SSDKWVQVIS 840
  841 EKKQGEGFPV NLARYIGVIY KENKFNIESF KNQNTNKGHL YENQPWNSSF NTSEKVSYVR 900
  901 PPFGIKFSTK GDVKNDFTVV FAQNDFAHKS NSKDTKETSL TNYKDQGSQE VSEALRTKEV 960
  961 MEYFDNLDEA NNELFFMGYT GILTGNEASA FKPLLDLNYK SLIEDKAENS NSLKKSNTNE1020
 1021 YSGTLNKIFY KGDLKTQNTG FYDLWKVFEN NTPLNKEEFH QQVDNEAKQT KTTTSKKPSK1080
 1081 RKPKAPKTQS TQGRKYKDEY SYIYEVISRH TLIWTDLVLD PNDSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle