YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25406133, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLMMFFT LLILSFTGIL EFPSASTSME HSIDPEPKLS DSTSDPFSDV LVAYKKWDFE  60
   61 VGCARFRENH KDAILGNVSS GSLQEFGCGK LKMKHVKVLV KGWTWIPDNL ENLYSCRCGM 120
  121 TCLWTKSSVL ADSPDALLFE TTTPPLQRRV GDPLRVYMEL EAGRKRSGRE DIFISYHAKD 180
  181 DVQTTYAGSL FHNNRNYHIS PHKNNDVLVY WSSSRCLPHR DRLAKSLLDL IPHHSFGKCL 240
  241 NNVGGLDSAL SMYPECVAEH NAEAKWYDHL HCAMSHYKFV LAIENTAVES YVTEKLFYAL 300
  301 DSGSVPIYFG ASNVQDFVPP HSVIDGSKFG SMQELAAYVK RLGDDPVAYS EYHAWRRCGL 360
  361 MGNYGKTRAV SLDTLPCRLC EEISRRGGKN AGV

Type	Start	End	Confidence
Signal Peptide	1	27	0.91
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	393	0.99