YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|161867976, gi...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTENTEPSSP SHPAPDPEIL KSTIRAMKQS EQRANNVPAL IKALLCTGTC LLISITGNAI  60
   61 QYWHSTNVER EYFATDNGRL VRLAPTSQPA WSQNDAMAFG SQALATAFNL DFVHYRSQIS 120
  121 SLSPRFSDEG FVGYVNALQA SNILETIKKE KMNLTATTGA GVLVRQGQMS DGVWFWTFQY 180
  181 PVRMRLVGQT TSKPEQSFVF EITIQRVDPR LKPSGMEIRQ MISRNAGPNS

Type	Start	End	Confidence
Cytoplasmic	1	38	0.61
Transmembrane Helix	39	60	0.57
Non-Cytoplasmic	61	230	0.76