YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7331185
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLARRACWR IKSYSSESLF KTYASVITDT SANEIDAEAP PPPRDKTKTR IEPQIAPAKR  60
   61 NSSCTSSDWR GMFSKRTLLI CALALILGSA QARPNTSAVG VAPRKVSQDI VDAVTQLNLG 120
  121 QSAPIDAVDV GLDPTPSARV PRPEPLKSGD ENAKGDEGHK MERYPLSSVD FARVKTPFII 180
  181 GIWILSASIA KIGFHMTPKL HLIFPESCLL IVVGVVIGVV LYFCTDVAVS PLTPNTFFFY 240
  241 MLPPIILDAG YFMPNRLFFD NLGTILLMAV VGTIFNIATI GGSLYACGKM GIYGESETPG 300
  301 LMDVFLFASL ISAVDPVAVL AVFEEIHVNE ILYIVVFGES LLNDAVTVVV MYHMMESYNE 360
  361 IGLDKIIAQD IASGVGSFFV VALGGTAIGI IWGFLTGLVT RFTDHVRVIE PIFIFVMAYL 420
  421 AYLNAEIFHM SGILAITFCG ITMKNYVESN ISQKSHTTVK YALKMLSSSA ETIIFMFLGV 480
  481 ATVNNMHVWN TWFVVLTIAF CSVFRVIGVI LLSALANRFR LHKLSRVDQF VMSYGGLRGA 540
  541 VAFALVLLVD ENVVKQKNMF VTTTIAVIYF TVFLQGITIK PLVKILNVKR ANKRKPTMNE 600
  601 RIHERFMDHL MAGIEDIVGK TGNYNVRDKF KRFDNRFIRP LLIRDLKGAE PKIIETYSKL 660
  661 TMRDAMEVMR RNPSTIGQMT GTESMSALFR NYTNNYIGGS PSLTNLDNTC SRNLDMAELD 720
  721 YNPSKKDLTD ARIHHLLAEE LKPYRRHRRL SYSRHAVDDR DLSTQVQVNY KMQMNFRRMF 780
  781 NDRKHHKRSK RGASNKEAKE NVKQNHVSFH DFQQNGTTKQ LTNAEECQQN PNEINVVGPS 840
  841 DDWDDGLTFT AKSSLAEHPI PEEDRNLSRE SDGERRVATP TATESQLPWK RQGDECTDAV 900
  901 QQNEFPAWAS NKEYLAYNSP SATFLGGINK PKQPKSVIGL FRRESSSSKA GSVGVGSTGA 960
  961 MDSAASGSET MVVSMSSQPP NAPSTSIHNP RLDKRSQSIS SSSLGAGAHQ LGPEGHSGPF1020
 1021 PVTASHRRNV RRGSMLELSG DTIPEESSYQ HGHSKSLCEP ADSDEWEGAP LSAAGGANSE1080
 1081 LLMRMSGREP LLPRPSNTPR AQIRRMNAGA VGGAGVSQAG RKNQVTKALL DYEDSETDSD1140
 1141 ENDDDEDEDF DSYDDENIVV TTFTTPATGR RPGSSPGSGS EANTATTTTT SIRLTRNNDE1200
 1201 SII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle