YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1362238, gi\|5...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQQFYGDK GYAPAPPQQA YGGPNYYPPQ QNYPQQGYAP PQGYPQGGYP AQQPMYVQQP  60
   61 QASDPGGDLC CGLLTVLLAV AVWMQCFKKL FGLFFLLFSK ESMHH

Type	Start	End	Confidence
Non-Cytoplasmic	1	64	0.58
Transmembrane Helix	65	87	0.66
Cytoplasmic	88	105	0.32