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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25354687, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSPSTVLN HPTHQSPTSL LPYPNSHFRI RPGFCNLMKR GKKNSDAGDR LTNSDTRTGS  60
   61 SELNAMMKPS LSSMKTMGLL LAVLMVASVM FSLSVVLRDP PSDDVIETEA ASRVLQSRLH 120
  121 QAIESDGGLS EKKAQLGNIN LVPSFDKESC LSRYEASLYR KESPFKQSSY LDYRLQRYED 180
  181 LHRRCGPFTR SYNLTLDKLK SGDRSDGEVS GCRYVIWLNS NGDLGNRMLS LASAFLYALL 240
  241 TNRFLLVELG VDMADLFCEP FPNTTWFLPP EFPLNSHFNE QSLLRNSGNP MVAYRHVVRD 300
  301 SSDQQKLFFC EDSQVLLEET PWLILKADSF FLPSLFSVSS FKQELQMLFP EKDTAFHFLS 360
  361 QYLFHPTNVV WGLITRYYNA YLAKADQRIG IYIGVSESGN EQFQHLIDQI LACGTRHKLL 420
  421 PEVDKQRNLP SSQVLNRKSK AVFISSSSPG YFKSIRDVYW ENPTVMGEII SVHKPSYKDY 480
  481 QKTPRNMESK RAWAEIYLLS CSDALVVTGL WSSLVEVAHG LGGLKPWVLN KAENGTAHEP 540
  541 YCVKARSIEP CSQATLFHGC KD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle