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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7225928, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKRFKINA ISLSIFLAYA LTPYSEAALV RDDVDYQIFR DFAENKGKFF VGATDLSVKN  60
   61 KQGQNIGNAL SNVPMIDFSV ADVNRRTLTV IDPQYAVSVK HVKGDEISYY GHHNGHLDVS 120
  121 NDENEYRSVA QNDYEPNKNW HHGNQGRLED YNMARLNKFV TEVAPIAPTS AGGGVETYKD 180
  181 KNRFSEFVRV GAGTQFEYNS RYNMTELSRA YRYAIAGTPY QDVNVTSNLN QEGLIGFGDN 240
  241 SKHHSPEKLK EVLSQNALTN YAVLGDSGSP LFAYDKQEKR WVFLGAYDYW AGYQKNSWQE 300
  301 WNIYKKEFAD EIKQRDNAGT IKGNGEHHWK TTGTNSHIGS TAVRLANNER DANNGQNVTF 360
  361 ENNGTLVLDQ NINQGAGGLF FKGDYTVKGI NNDITWLGAG IDVADGKKVV WQVKNPNGDR 420
  421 LAKIGKGTLE INGTGVNQGQ LKVGDGTVIL NQQADADKKV QAFSQVGIVS GRGTLVLNSS 480
  481 NQINPDNLYF GFRGGRLDAN GNDLTFEHIR NVDEGARIVN HNTGHASTIT LTGKSLITDP 540
  541 KTISIHYIQN NDDDDAGYYY YRPRKPIPQG KDLYFKNYRY YALKSGGSVN APMPENGQTE 600
  601 NNDWILMGST QEEAKKNAMN HKNNQRISGF SGFFGEENGK GHNGALNLNF NGKSAQNRFL 660
  661 LTGGTNLNGK ISVTQGNVLL SGRPTPHARD FVNKSSARKD AHFSKNNEVV FEDDWINRTF 720
  721 KATEIAVNQS ASFSSGRNVS DITANITATD NAKVNLGYKN GDEVCVRSDY TGYVTCNTGN 780
  781 LSDKALNSFG ATQINGNVNL NQNAALVLGK AALWGQIQGQ GNSRVSLNQH SKWHLTGDSQ 840
  841 VHNLSLADSH IHLNNASDAQ SANKYHTLKI NHLSGNGHFH YLTHLAKNLG DKVLVKESAS 900
  901 GHYQLHVQDK TGEPNQEGLN LFDASSVQDR SRLSVSLANN HVDLGALRYT IKTENGITRL 960
  961 YNPYAENRRR VKPAPSPATN TASQAQKATQ TDGAQIAKPQ NIVVAPPSPQ ANQAEEAKRQ1020
 1021 QAKAEQVKRQ QAEAERKSAE LAKQKAEAER EARELATRQK AEQERSSAEL ARRHEKEREA1080
 1081 AELSAKQKVE AEREAQALAV RRKAEAEEAK RQAAELARRH EKEREAAELS AKQRVGEEER1140
 1141 RQTAQSQPQR RKRRAAPQDY MAASQDRPKR RGHRSVQQNN VEIAQAQAEL ARRQQEERKA1200
 1201 AELLAKQRAE AEREAQALAA RRKAEAEEAK RQAAELAHRQ EAERKAAELS ANQKAAAEAQ1260
 1261 ALAARQQKAL ARQQEEARKA AELAVKQKAE TERKTAELAK QRAAAEAAKR QQEARQTAEL1320
 1321 ARRQEAERQA AELSAKQKAE TDREAAESAK RKAEEEEHRQ AAQSQPQRRK RRAAPQDYMA1380
 1381 ASQNRPKRRG RRSTLPAPPS PSFDSSAYAA PRALHNPDWY ENDYEEIPLD ALEDENVSES1440
 1441 VDTSDKQPQD NTELHEKYEN DYEEIPLDAL EDEDVSESVD TSDKQPQDNT ELHEKVETVS1500
 1501 LQPRAAQPRA QAATQLQAQA AAQADAVSTN TNSALSDAMA STQSILLDTG ASLTRHIAQK1560
 1561 SRADAEKNSV WMSNTGYGRD YASAQYRRFS SKRTQTQIGI DRSLSENMQI GGVLTYSDSQ1620
 1621 HTFDQASGKN TFVQANLYGK YYLNDAWYVA GDIGAGSLRS RLQTQQKANF NRASIQTGLT1680
 1681 LGNTLKINQF EIVPSAGIRY SRLSSADYKL GNDSVKVSSM SVKTLTAGLD FAYRFKVGNL1740
 1741 TVKPLLSAAY FANYGKGGVN VGGNSFVYKA DNQQQYSAGA ALLYRNVTLN VNGSITKGKQ1800
 1801 LEKQKSGQIK IQIRF

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