YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1573058
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSPTPFALA IFLGILYHIP TFSNQRSIMN NLELEQLINQ KLSSDKINDY APNGLQVEGK  60
   61 TEIKKIITGV TASQALINYA ISQNADAILV HHGYFWKSET PCIRGMKGKR IKALLVNDIN 120
  121 LYGYHLPLDV HPELGNNAQL AKLLDIENLQ PLEKGSVSIP VWGELKEPMT GKDFAEKIEK 180
  181 VLNRKPLICI ENGPHLIRKI GICTGGGQGY IDLAAEQGCD AFITGEVSEQ TIHSAREQGL 240
  241 YFFSAGHHAT ERYGIKALGE WLAKEYGFDV EFKDIDNPA

Type	Start	End	Confidence
Signal Peptide	1	23	0.85
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	279	0.98