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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15217465, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSHCYWFY CIITIYFSFL IHSLASPSLH FCRHDQRDGL LKFRDEFPIF ESKSSPWNKT  60
   61 TDCCSWDGVT CDDKSGQVIS LDLRSTLLNS SLKTNSSLFR LQYLRHLDLS GCNLHGEIPS 120
  121 SLGNLSRLEN LELSSNRLVG EIPYSIGNLK QLRNLSLGDN DLIGEIPSSL GNLSLLLDLD 180
  181 LWNNSLVGEV PASIGNLNEL RVMSLDRNSL SGSIPISFTN LTKLSEFRIF FNNFTSLPSD 240
  241 LSGFHNLVTF DISANSFSGH FPKFLFSIPS LAWVSMDRNQ FSGPIEFANI SSSSKLQNLI 300
  301 LTRNKLDGSI PESISKFLNL VLLDVAHNNI SGPVPRSMSK LVSLRIFGFS NNKLEGEVPS 360
  361 WLWRLSSTML SHNSFSSFEK IYSKETMIQV LDLSFNSFRG TFPVWICKLK GLHFLDLSNN 420
  421 LFNGSIPLCL RNFNLTGLIL GNNKFSGTLP DIFANNTNLQ SLDVSGNQLE GKFPKSLINC 480
  481 KGLHFVNVES NKIKDTFPSW LGSLPSLQVL ILRSNDFYGP LYHPSMSIGF QGLRIIDISH 540
  541 NGFSGVLPPN FFSSWREMIT LVHGSYEYIE DIQNYSLIYR SMEMVNKGVE MSFERIRQDF 600
  601 RAIDFSENRI YGEIPESIGC LEELRLLNLS GNAFTSDIPR VWENLTKLET LDLSRNKLSG 660
  661 QIPQDLGKLS FLSYMNFSHN RLQGPVPRGT QFQRQRCSSF LDNHRLYGLE DICEETHVPN 720
  721 PTSQPSEDLL DEEEKMFNWV AAAIAYGPGV FCGLVIGYIF TSHHHEWFTE KFGRKKIRVT 780
  781 TSAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle