YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|541291
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEQPLIAAL SLQGAGAPRV GGDRIRLLEA IARHGTIAGA AREVGLSYKT AWDAVGTLNN  60
   61 LFEQPLVEAA PGGRTGGNAR VTEAGQALIA GFGLLEGALT KALGVLEGGV SAPEKALNTL 120
  121 WSLTMRTSNR NTLRCTVTRV TLGAVNAEVE LALTDGHSLT AVITERSATE MGLAPGVEVF 180
  181 ALIKASFVML AAGGDPGRIS ACNRLTGIVA ARTDGPVNTE IILDLGNCKS ITAVITHTSA 240
  241 DALGLAPGVP ATALFKASHV ILAMP

Type	Start	End	Confidence
Signal Peptide	1	22	0.70
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	265	0.98