YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57237712, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNKIVDLV FPFLGPLIAP VLKAKSLTIV GFLVCILAII IVPLPSPILD FFLALSIALS  60
   61 VLIILISIYI PKPTDLTTFP TLILIITLFR LSLNIATTRM ILSEGQNGPE AVSEIIAAFG 120
  121 EFVVGGNMVI GVIVFCILVL INFMVVTKGS TRVSEVQARF TLDAMPGKQM AIDADLNAGL 180
  181 IDEQTARARR QEVIAEANFY GAMDGSSKFI KGDAVAGIII TIINIIGGFL IGSFQHDMAL 240
  241 SDAASTYTIL TIGDGLVSQI PGLITSTATA IIITRASKDE ENFAEGTLTQ LLSEYRTLLI 300
  301 VGFVLFIFAL VPGLPTLSLG FMALVFLSLG YLTKQVKEGK IDITTVKKSK PSAAVASQSG 360
  361 AGGTTAAPAK KSEEEILKEE EHKINDILKV EILELELGYG LIKLAENELT ERIRSMRRSI 420
  421 AESLGFLMPK IRIRDNLRLK PNEYSFKLKG VSIASAEIYP DKYLAMDSGF ITEEIEGIAT 480
  481 KEPAFNSDAL WIDANLKDEA TLNGYIVIDP ASVISTHMSE LIKAHASELL TRQEVQNLLD 540
  541 KVKNDYPIIV EGALGVAPVS LIQKILKDLL KHHIPIKDML TILESVSDIA EVSKSFDMII 600
  601 EHVRASLARM ITNMYLDDKG NLDIFILDSA SSAVLMENVQ FRDGSYHLPL SVAQTGTLVD 660
  661 TLRAEVAAVA NGRIKPFILC VEPQLRKFIA DICYNFSINI VVLSFAEIAE NTNFNTEGII 720
  721 RIEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle