YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254673861
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAFKTLIWI VNIISALAVI VLVLLQHGKG ADAGATFGSG SGSAQGVFGS AGNANFLSRS  60
   61 TAVAATFFFA TCMAMVYIHT HTTKHGLDFS NVQQTQQAPK PVSNTEPSAP VPQQQK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.90
Transmembrane Helix	7	28	0.91
Non-Cytoplasmic	29	55	0.67
Transmembrane Helix	56	80	0.80
Cytoplasmic	81	116	0.67