YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HEM62_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHSSTLFT SPSSFILFSS HRLKSSPNYF TYHFPRSVKR PHFDLRCSVS IEKEVPETER  60
   61 PFTFLRVSDG DQTQSSSYSV RARFEKMIRT AQDKVCEAIE AVEEGPKFKE DVWSRPGGGG 120
  121 GISRILQDGN VWEKAGVNVS VIYGVMPPEA YRAAKAATSE QKPGPIPFFA AGTSSVLHPQ 180
  181 NPFAPTLHFN YRYFETDAPK DVPGAPRQWW FGGGTDFTPA YIFEEDVKHF HSV

Type	Start	End	Confidence
Signal Peptide	1	22	0.68
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	233	0.99