YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14190433, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLVAHFST PLITARLVPR CIIHRASISA VSFSTVRRRF SPLTMASAAQ SSSQAVSYGS  60
   61 GNSDTDVFKL IQAHEEKAAR LSPVEEIRTV LNGSICGMLS TFSQKYEGYP SGSMVDFACD 120
  121 ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS 180
  181 AYLAKHPKAF WVDFGDFSFM RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA 240
  241 KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR 300
  301 AQDRK

Type	Start	End	Confidence
Signal Peptide	1	55	0.72
N-region	1	46
H-region	47	52
C-region	53	55
Cleavage Site	55	56
Non-Cytoplasmic	56	305	0.99