YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ARL_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIREFSSLQN DIINIQEHYS LNNNMDVRGD HNRKNTSFRG SAPAPIMGKQ ELFRTLSSQN  60
   61 SPRRLISASY FSLESMVVLV GLTASLLILP LILPPLPPPP FMLLLIPIGI MVLLMVLAFM 120
  121 PSSNSKHVSS SSTFM

Type	Start	End	Confidence
Cytoplasmic	1	69	0.97
Transmembrane Helix	70	93	0.90
Non-Cytoplasmic	94	100	0.83
Transmembrane Helix	101	121	0.94
Cytoplasmic	122	135	0.92