YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD6C_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSHRLLRP ATTTIKNTFS SLFIRSLSSS SSGSSLDPKI DLEEAAAQLG KSSSTSTSPY  60
   61 KGRNFHWVFL GCPGVGKGTY ASRLSSLLGV PHIATGDLVR EELSSSGLLS SQLKELVNHG 120
  121 KLVPDEFIIS LLSKRLQAGK DKGESGYILD GFPRTVTQAE ILEGVTNIDL VINLKLREEA 180
  181 LLAKCLGRRI CSECGGNYNV ACIDIKGDDD TPRMYMPPLL PPPNCESKLI SRADDTEEVV 240
  241 KERLRIYNKM TQPVEEFYKK RGKLLEFELP GGIPESWARL LRALHLEDDK QSAIA

Type	Start	End	Confidence
Signal Peptide	1	33	0.82
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	295	0.99