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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XG113_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGWRNGFR DATNSKPLFV TIYATVIIGV LVSSFYVFSA IYSPTNGSSS FLSFPPLSTS  60
   61 GRIHSLPQEN ATLELPVAPP PPPQALPPPV LEEAQGNSLG KIWVSPPRDK KMPPLETFKL 120
  121 TKELFGERVK DNVIIVTFGN YAFMDFILTW VKHLTDLDLS NILVGAMDTK LLEALYWKGV 180
  181 PVFDMGSHMS TVDVGWGSPT FHKMGREKVI LIDSVLPFGY ELLMCDTDMV WLKNPMPYLA 240
  241 RFPDADVLTS SDQVVPTVID DSLDIWQQVG AAYNIGIFHW RPTESAKKLA KEWKEILLAD 300
  301 DKVWDQNGFN EIVRRQLGPS VEGDSGLFYA YDGNLKVGIL PASIFCSGHT YFVQAMYQQL 360
  361 RLEPYAVHTT FQYAGTEGKR HRLREGMVFY DPPEYYDSPG GFIAFKPSIP KSLLLDGKHT 420
  421 IESHFILVNH QMKQIRSALA IASLLNRTLV MPPIWCRLDR LWFGHPGTLQ GSMTRQPFIC 480
  481 PLDHVFEVNI MLKELPEEEF GPGIGIREYS FLDNPLLPKQ VKESWLDVQL CQEGKEGCEA 540
  541 SNNTSPSRVL KFPKRSNEDT FKAIFSSFDD VKVIKFSSIE DAFIGFSDKE REERFRRRVK 600
  601 RYVGIWCCEE NKTPGHIYYD MYWDEKPGWK PVPPQTPEED HPPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle