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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRRP1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLTCFTPS FSRACCPLFA MMLKVPSVHL HHPRFSPFRF YHTSLLVKGT RDRRLILVER  60
   61 SRHLCTLPLA AAKQSAASPS ENLSRKAKKK AIQQSPEALL KQKLDMCSKK GDVLEALRLY 120
  121 DEARRNGVQL SQYHYNVLLY VCSLAEAATE SSPNPGLSRG FDIFKQMIVD KVVPNEATFT 180
  181 NGARLAVAKD DPEMAFDMVK QMKAFGIQPR LRSYGPALFG FCRKGDADKA YEVDAHMVES 240
  241 EVVPEEPELA ALLKVSMDTK NADKVYKTLQ RLRDLVRQVS KSTFDMIEEW FKSEVATKTG 300
  301 VKKWDVKKIR DAVVSGGGGW HGQGWLGTGK WNVKRTEMDE NGVCKCCKEK LVCIDINPVE 360
  361 TETFAASLTR LACEREVKAN FNQFQEWLER HGPFDAVIDG ANMGLVNQRS FSFFQLNNTV 420
  421 QRCQQISPSK RLPLVILHKS RVNGGPATYP KNRALLEKWK NAGALYATPP GSNDDWYWLY 480
  481 AAVSCKCLLV TNDEMRDHLF QLLGNSFFPR WKEKHQVRIS VTREDGLKLN MPPPYSIVIQ 540
  541 ESEDGTWHVP MSVEDDLQTS RQWLCAKRSK TP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle