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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH3_ARATH
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMIFFSKLN RSISRSKGFL YGGGVRSAAR LLTSPGLEAA SVNEVEGGLG FIRRHFASLA  60
   61 SRKGLVNNDL IGVFANPRLR RFFSDEAPKK KNYENYFPKD KQEPKSDQKS EHKEGSEKNE 120
  121 NENVGDMFMN RFQNLLIPLL ALAVFFSTFS FGSGEQQQIS FQEFKNKLLE PGLVDHIDVS 180
  181 NKSVAKVYVR STPKDQQTTD VVHGNGNGIP AKRTGGQYKY YFNIGSVDSF EEKLEEAQEA 240
  241 LGVDRHEYVP VTYVSEMVWY QEFMRFAPTL LLLGTLIYGA RRMQGGLGVG GTGGKNGRGI 300
  301 FNIGKATITR ADKHSKNKIY FKDVAGCDEA KQEIMEFVHF LKNPKKYEDL GAKIPKGALL 360
  361 VGPPGTGKTL LAKATAGESG VPFLSISGSD FMEMFVGVGP SRVRHLFQEA RQAAPSIIFI 420
  421 DEIDAIGRAR GRGGLGGNDE RESTLNQLLV EMDGFGTTAG VVVLAGTNRP DILDKALLRP 480
  481 GRFDRQITID KPDIKGRDQI FKIYLKKIKL DHEPSYYSQR LAALTPGFAG ADIANVCNEA 540
  541 ALIAARHEGA TVTMAHFESA IDRVIGGLEK KNRVISKLER RTVAYHESGH AVVGWFLEHA 600
  601 EPLLKVTIVP RGTAALGFAQ YVPNENLLMT KEQLFDMTCM TLGGRAAEQV LIGKISTGAQ 660
  661 NDLEKVTKMT YAQVAVYGFS DKVGLLSFPP RDDGYDFSKP YSNKTGAIID EEVRDWVAKA 720
  721 YERTVELVEE HKVKVAEIAE LLLEKEVLHQ DDLLKILGER PFKSAEVTNY DRFKSGFEET 780
  781 EKDSAATPTV EPVVDDGAPP PFEPQVVPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle