YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ORN_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLSNAFSV LAFADEDAPM ASSSSTGKQE ESVNGSLEDG DYKQPLVWID LEMTGLNVEV  60
   61 DRILEIACII TNGDLTQSVE GPDLVVRQTK DCLDKMDDWC QTHHGASGLT KKVLLSAITE 120
  121 REAEQKVIEF VKKHVGSGNP LLAGNSVYVD FLFLKKYMPE LAALFPHILV DVSSVKALCA 180
  181 RWFPIERRKA PAKKNNHRAM DDIRESIKEL KYYKKTIFKA RR

Type	Start	End	Confidence
Signal Peptide	1	14	0.65
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	222	0.96