YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1079090, gi\|4...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQPKKKRKSR TAFTNHQIFE LEKRFLYQKY LSPADRDEIA ASLGLSNAQV ITWFQNRRAK  60
   61 QKRDIEELKK DFDSVKVFSA HKSFLENVND LSILKKKPMH ESDMVGLAAA AAAAGMVVPV 120
  121 PGSVPMGGAP PK

Type	Start	End	Confidence
Cytoplasmic	1	103	0.91
Transmembrane Helix	104	124	0.87
Non-Cytoplasmic	125	132	0.82