YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1658330
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSIFLMVVDI GGFCLPPDSG ERVSFKITLL LGYSVFLIIV SDTLPATAIG TPLIGVYFVV  60
   61 CMALLVISLA ETIFIVQLVH KQDLQRPVPD WLRHLVLDRI AWLLCLGEQP MAHRPPATFQ 120
  121 ANKTDDCSGS LLPAMGNHCS HVGSPQDLEK TSRSRDSPLP PPREASLAVR GLLQELSSIR 180
  181 HSLEKRDEMR EVARDWLRVG YVLDRLLFRI YLLAVLAYSI TLVTLWSIWH YS

Type	Start	End	Confidence
Cytoplasmic	1	26	0.94
Transmembrane Helix	27	49	0.84
Non-Cytoplasmic	50	53	0.81
Transmembrane Helix	54	76	0.92
Cytoplasmic	77	206	0.98
Transmembrane Helix	207	229	0.93
Non-Cytoplasmic	230	232	0.86