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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|510506, gi|10...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFRKDLVAR CSSPWFGIGS ISVLFAFVVM LILLTTTGVI KWNQSPPCSV LVGNEASEVT  60
   61 AAKSTNTDLS KLHNSSVRAK NGQGIGLAQG QSGLGAAGVG SGGGSSAATV TTATSNSGTA 120
  121 QGLQSTSASA EATSSAATSS SQSSLTPSLS SSLANANNGG ARTFPARSFP PDGTTFGQIT 180
  181 LGQKLTKEIQ PYSYWNMQFY QSEPAYVKFD YTIPRGASIG VYGRRNALPT HTQYHFKEVL 240
  241 SGFSASTRTA RAAHLSITRE VTRYMEPGHW FVSLYNDDGD VQELTFYAAV AEDMTQNCPN 300
  301 GCSGNGQCLL GHCQCNPGFG GDDCSESVCP VLCSQHGEYT NGECICNPGW KGKECSLRHD 360
  361 ECEVADCSGH GHCVSGKCQC MRGYKGKFCE EVDCPHPNCS GHGFCADGTC ICKKGWKGPD 420
  421 CATMDQDALQ CLPDCSGHGT FDLDTQTCTC EAKWSGDDCS KELCDLDCGQ HGRCEGDACA 480
  481 CDPEWGGEYC NTRLCDVRCN EHGQCKNGTC LCVTGWNGKH CTIEGCPNSC AGHGQCRVSG 540
  541 EGQWECRCYE GWDGPDCGIA LELNCGDSKD NDKDGLVDCE DPECCASHVC KTSQLCVSAP 600
  601 KPIDVLLRKQ PPAITASFFE RMKFLIDESS LQNYAKLETF NESRSAVIRG RVVTSLGMGL 660
  661 VGVRVSTTTL LEGFTLTRDD GWFDLMVNGG GAVTLQFGRA PFRPQSRIVQ VPWNEVVIID 720
  721 LVVMSMSEEK GLAVTTTHTC FAHDYDLMKP VVLASWKHGF QGACPDRSAI LAESQVIQES 780
  781 LQIPGTGLNL VYHSSRAAGY LSTIKLQLTP DVIPTSLHLI HLRITIEGIL FERIFEADPG 840
  841 IKFTYAWNRL NIYRQRVYGV TTAVVKVGYQ YTDCTDIVWD IQTTKLSGHD MSISEVGGWN 900
  901 LDIHHRYNFH EGILQKGDGS NIYLRNKPRI ILTTMGDGHQ RPLECPDCDG QATKQRLLAP 960
  961 VALAAAPDGS LFVGDFNYIR RIMTDGSIRT VVKLNATRVS YRYHMALSPL DGTLYVSDPE1020
 1021 SHQIIRVRDT NDYSQPELNW EAVVGSGERC LPGDEAHCGD GALAKDAKLA YPKGIAISSD1080
 1081 NILYFADGTN IRMVDRDGIV STLIGNHMHK SHWKPIPCEG TLKLEEMHLR WPTELAVSPM1140
 1141 DNTLHIIDDH MILRMTPDGR VRVISGRPLH CATASTAYDT DLATHATLVM PQSIAFGPLG1200
 1201 ELYVAESDSQ RINRVRVIGT DGRIAPFAGA ESKCNCLERG CDCFEAEHYL ATSAKFNTIA1260
 1261 ALAVTPDSHV HIADQANYRI RSVMSSIPEA SPSREYEIYA PDMQEIYIFN RFGQHVSTRN1320
 1321 ILTGETTYVF TYNVNTSNGK LSTVTDAAGN KVFLLRDYTS QVNSIENTKG QKCRLRMTRM1380
 1381 KMLHELSTPD NYNVTYEYHG PTGLLRTKLD STGRSYVYNY DEFGRLTSAV TPTGRVIELS1440
 1441 FDLSVKGAQV KVSENAQKEM SLLIQGATVI VRNGAAESRT TVDMDGSTTS ITPWGHNLQM1500
 1501 EVAPYTILAE QSPLLGESYP VPAKQRTEIA GDLANRFEWR YFVRRQQPLQ AGKQSKGPPR1560
 1561 PVTEVGRKLR VNGDNVLTLE YDRETQSVVV MVDDKQELLN VTYDRTSRPI SFRPQSGDYA1620
 1621 YVDLEYDRFG RLVSWKWGVL QEAYSFDRNG RLNEIKYGDG STMVYAFKDM FGSLPLKVTT1680
 1681 PRRSDYLLQY DDAGALQSLT TPRGHIHAFS LQTSLGFFKY QYYSPINRHP FEILYNDEGQ1740
 1741 ILAKIHPHQS GKVAFVHDTA GRLETILAGL SSTHYTYQDT TSLVKSVEVQ EPGFELRREF1800
 1801 KYHAGILKDE KLRFGSKNSL ASARYKYAYD GNARLSGIEM AIDDKELPTT RYKYSQNLGQ1860
 1861 LEVVQDLKIT RNAFNRTVIQ DSAKQFFAIV DYDQHGRVKS VLMNVKNIDV FRLELDYDLR1920
 1921 NRIKSQKTTF GRSTAFDKIN YNADGHVVEV LGTNNWKYLF DENGNTVGVV DQGEKFNLGY1980
 1981 DIGDRVIKVG DVEFNNYDAR GFVVKRGEQK YRYNNRGQLI HSFERERFQS WYYYDDRSRL2040
 2041 VAWHDNKGNT TQYYYANPRT PHLVTHVHFP KISRTMKLFY DDRDMLIALE HEDQRYYVAT2100
 2101 DQNGSPLAFF DQNGSIVKEM KRTPFGRIIK DTKPEFFVPI DFHGGLIDPH TKLVYTEQRQ2160
 2161 YDPHVGQWMT PLWETLATEM SHPTDVFIYR YHNNDPINPN KPQNYMIDLD SWLQLFGYDL2220
 2221 NNMQSSRYTK LAQYTPQASI KSNTLAPDFG VISGLECIVE KTSEKFSDFD FVPKPLLKTE2280
 2281 PKMRNLLPRV SYRRGVFGEG VLLSRIGGRA LVSVVDGSNS VVQDVVSSVF NNSYFLDLHF2340
 2341 SIHDQDVFYF VKDNVLKLRD DNEELRRLGG MFNISTHEIS DHGGSAAKEL RLHGPDAVVI2400
 2401 IKYGVDPEQE RHRILKHAHK RAVERAWELE KQLVAAGFQG RGDWTEEEKE ELVQHGDVDG2460
 2461 WNGIDIHSIH KYPQLADDPG NVAFQRDAKR KRRKTGSSHR SASNRRQLKF GELSA

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