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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|416180, gi|631290
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNFITFDL KMSLLPSNLF SAFITLCFGA IFFLPDSSKL LSGVLFHSSP ALQPAADHKP  60
   61 GPGARAEDAA EGRARRREEG APGDPEAALE DNLARIRENH ERALREAKET LQKLPEEIQR 120
  121 DILLEKKKVA QDQLRDKAPF RGLPPVDFVP PIGVESREPA DAAIREKRAK IKEMMKHAWN 180
  181 NYKGYAWGLN ELKPISKGGH SSSLFGNIKG ATIVDALDTL FIMEMKHEFE EAKSWVEENL 240
  241 DFNVNAEISV FEVNIRFVGG LLSAYYLSGE EIFRKKAVEL GVKLLPAFHT PSGIPWALLN 300
  301 MKSGIGRNWP WASGGSSILA EFGTLHLEFM HLSHLSGNPI FAEKVMNIRT VLNKLEKPQG 360
  361 LYPNYLNPSS GQWGQHHVSV GGLGDSFYEY LLKAWLMSDK TDLEAKKMYF DAVQAIETHL 420
  421 IRKSSSGLTY IAEWKRGLLE HKMGHLTCFA GGMFALGADA APEGMAQHYL ELGAEIARTC 480
  481 HESYNRTFMK LGPEAFRFDG GVEAIATRQN EKYYILRPEV METYMYMWRL THDPKYRKWA 540
  541 WEAVEALENH CRVNGGYSGL RDVYLLHESY DDVQQSFFLA ETLKYLYLIF SDDDLLPLEH 600
  601 WIFNSEAHLL PILPKDKKEV EIREE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle