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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|458224
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQIGKVNGVH HIKVSLEEKS ATIIYDPKLQ TPKTLQEAID DMGFDALLHN ANPLPVLTNT  60
   61 VFLTVTAPLT LPWDHIQSTL LKTKGVTGVK ISPQQRSAVV TIIPSVVSAS QIVELVPDLS 120
  121 LDMGTQEKKS GACEEHSTPQ AGEVMLKMKV EGMTCHSCTS TIEGKVGKLQ GVQRIKVSLD 180
  181 NQEATIVFQP HLITAEEIKK QIEAVGFPAF IKKQPKYPIL GAIDVERLKN TPVKSSEGSQ 240
  241 QKSPSYPSDS TTMFTIEGMH CKSCVSNIES ALSTLQYVSS IVVSLENRSA IVKYNASLVT 300
  301 PEMLRKAIEA ISPGQYRVSI ASEVESTASS PSSSSLQKMP LNIVSQPLTQ EAVININGMT 360
  361 CNSCVQSIEG VISKKPGVKS IHVSLANSTG TIEFDPLLTS PETLREAIED MGFDAALPAD 420
  421 MKEPLVVIAQ PSLETPLLPS SNEPENVMTS VQNKCYIQVS GMTCASCVAN IERNLRREEG 480
  481 IYSVLVALMA GKAEVRYNPA VIQPRVIAEF IRELGFGAMV MENAGEGNGI LELVVRGMTC 540
  541 ASCVHKIEST LTKHKGIFYC SVALATNKAH IKYDPEIIGP RDIIHTIGSL GFEASLVKKD 600
  601 RSANHLDHKR EIKQWRGSFL VSLFFCIPVM GLMVYMMVMD HHLATLHHNQ NMSNEEMINM 660
  661 HSAMFLERQI LPGLSIMNLL SLLLCLPVQF FGGWYFYIQA YKALKHKTAN MDVLIVLATT 720
  721 IAFAYSLVIL LVAMFERAKV NPIAFFDTSP MLFVFIALGR WLEHIAKGKT SEALAKLISL 780
  781 QATEATIVTL NSENLLLSEE QVDVELVQRG DIIKVVPGGK FPVDGRVIEG HSMVDESLIT 840
  841 GEAMPVAKKP GSTVIAGSTN QNGSLLIRAT HVGADTTLSQ IVKLVEEAQT SKAPIQQFAD 900
  901 KLSGYFVPFI VLVSIVTLLV WIIIGFQNFE IVETYFPGYN RSISRTETII RFAFQASITV 960
  961 LCIACPCSLG LATPTAVMVG TGVGAQNGIL IKGGEPLEMA HKVKVVVFDK TGTITHGTPV1020
 1021 VNQVKVLVES NKISRNKILA IVGTAESNSE HPLGAAVTKY CKKELDTETL GTCTDFQVVP1080
 1081 GCGISCKVTN IEGLLHKSNL KIEENNIKNA SLVQIDAINE QSSTSSSMII DAHLSNAVNT1140
 1141 QQHKVLIGNR EWMIRNGLVI SNDVDESMIE HERRGRTPVL VTIDDELCGL IAIADTVKPE1200
 1201 AELAVHILKS MGLEVVLMTG DNSKTARSIA SQVGITKVFA EVLPSHKVAK VKQLQEEGKR1260
 1261 VAMVGDGIND SPALAMANVG IAIGTGTDVA IEAADVVLIR NDLLDVVASI DLSRKTVKRI1320
 1321 RINFVFALIY NLVGIPIAAG VFLPIGLVLQ PWMGSAAMAA SSVSVVLSSL FLKLYRKPTY1380
 1381 DNYELHPRSH TGQRSPSEIS VHVGIDDTSR NSPRLGLLDR IVNYSRASIN SLLSDKRSLN1440
 1441 SVVTSEPDKH SLLVGDFRED DDTTL

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Created and Maintained by: Michael Riffle