YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|482621
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIALMFLLA LYQMQSAIHS EIIETPSSYN DNSLLEAAAE EPNSRATASE SDLLDGLMST  60
   61 DNPNPEQQTE LEFRYPISAI GIGYAKNSVV LRFQKHARKQ NFKYDPDYEM KRKSLQDNFM 120
  121 HFGKRQAEQL PQATGPGYYE AIKRAAMDRY GRDPKQDFMR FGRAPPSDFM RFGRAPSDFM 180
  181 RFGRDPSQDF MRFGRSDNFM RFGRNLNFHE ELRSPKQDFM RFGRPDNFMR FGRSAPTEFE 240
  241 RNGKMDSNFM RFGKRSGVMA KLTKSQLQQN KLTTADGKQQ PAEEGNPTDK AISMLFNKHQ 300
  301 QQQQQQQGQR LQQEDRQQMK SSAEQNNLEE ASVEQFYEP

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	339	0.99