YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|100636, gi\|65...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSVLLV VALFAVFLGS AHGIAKVPPG PNITAEYGDK WLDAKSTWYG KPTGAGPKDN  60
   61 GGACGYKDVD KAPFNGMTGC GNTPIFKDGR GCGSCFEIKC TKPESCSGEA VTVTITDDNE 120
  121 EPIAPYHFDL SGHAFGSMAK KGEEQKLRSA GELELQFRRV KCKYPDGTKP TFHVEKASNP 180
  181 NYLAILVKYV DGDGDVVAVD IKEKGKDKWI ELKESWGAVW RIDTPDKLTG PFTVRYTTEG 240
  241 GTKSEVEDVI PEGWKADTSY SAK

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	263	0.99