YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|506666
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVLLLSGALA LTQTWAGSHS MRYFSTSVSR PGRGEPRFIA VGYVDDTQFV RFDSDAASQR  60
   61 MEPRAPWIEQ EGPEYWDRET RSVKAGAQIY RANLGTLRGY YNQSEDGSHT IQLMFGCDVG 120
  121 SDGRFLRGYE QLAYDGKDYI ALNEDLRSWT AADMAAQITQ RKWEAVHAAE QQRAYLEGRC 180
  181 VESLRRYLEN GKETLQRTDP PKTHMTHHPI SDREATLRCW ALGFYPAEIT LTWQRDGEDQ 240
  241 TQDTELVETR PAGDGTFQKW AAVVVPSGEE QRYTCHVQHE GLPKPLTLRW EPSSQPTIPI 300
  301 VGIIAGLVLL GAVITGAVVA AVMWRRKSSD RKGGSYSQAA SSDSAQGSDV SLTACKV

Type	Start	End	Confidence
Non-Cytoplasmic	1	299	0.99
Transmembrane Helix	300	322	0.95
Cytoplasmic	323	357	0.96