YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15600235, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLASSLESL RKIDINDLDL NNIGSWPAAV KVIVCVLLTA AVLALGYNFH LSDMQAQLEQ  60
   61 QAAEEETLKQ QFSTKAFQAA NLEAYKAQMK EMEESFGALL RQLPSDTEVP GLLEDITRTG 120
  121 LGSGLEFEEI KLLPEVAQQF YIELPIQISV VGGYHDLATF VSGVSSLPRI VTLHDFEIKP 180
  181 VAPGSTSKLR MSILAKTYRY NDKGLKK

Type	Start	End	Confidence
Cytoplasmic	1	27	0.62
Transmembrane Helix	28	51	0.81
Non-Cytoplasmic	52	207	0.70