YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|107104143
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARINLLPWR EELREQRKQQ FLVILGGVLV ASAALVFLGD QYFTAAIENQ NARNDFLRKE  60
   61 IVVLDARIKE ISELKSRRQQ LLERMKIIQD LQGNRPIIGR VFDQLVRTLP DGVYFTDLKM 120
  121 TGKNIAIAGA AESNNRVSNL MRNMDASEWL TAPTLNEVKA VTQGAVDQAN VFQLTVQQTQ 180
  181 PGEEDAKAKH GVAQGAKK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	40	0.94
Non-Cytoplasmic	41	198	0.99