YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|974332\|gb\|AAA...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVTMLGAG SWGTALALVL TDNGNEVCVW AHRADLIHQI NELHENKDYL PNVKLSTSIK  60
   61 GTTDMKEAVS DADVIIVAVP TKAIREVLRQ AVPFITKKAV FVHVSKGIEP DSLLRISEIM 120
  121 EIELPSDVRR DIVVLSGPSH AEEVGLRHAT TVTASSKSMR AAEEVQDLFI NHNFRVYTNP 180
  181 DIIGVEIGGA LKNIIALAAG ITDGLGYGDN AKAALITRGL AEIARLGTKM GGNPLTFSGL 240
  241 TGVGDLIVTC TSVHSRNWRA GNLLGKGYKL EDVLEEMGMV VEGVRTTKAA YQLSKKYDVK 300
  301 MPITEALHQV LFNGQKVETA VESLMARGKT HEMEDLVNTF ENQVK

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	345	0.99