YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109130
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV AFSECIVKIP LRRVKTMRNT LSGKKMLNSF LKEHAYRLSQ ISFRASNLTI  60
   61 HPLRNIMDML YVGNITIGTP PQEFQVVFDT GSSDLLVPSI NCLSPTKRPC SKQDKFKHHQ 120
  121 SSTFRFTNDT FRIYFGSGTM RGFVAHDTVR IGDLVSTDQP FGLIFLESWL DGIPFDGILG 180
  181 LNYPKISFSG AIPIFDKLKN EGAFSEPVFA FYLNKDKQEG SVVMFGGVDH RYYKGELNWV 240
  241 PLIHPGEWSI PLDRISMRRK VIACSGGCEA LVGTGTSLIL GPRTVVENIQ KHIGATQQCF 300
  301 EYFVSCSAVY ALPSIVFTIN GINYPVPPQA YLVKDSRGQC YSPFQVNRAN PSAENWILGD 360
  361 VFLRRYFSVF DRGNDRIGLA RAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.94
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	383	0.99