YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55741639
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFLVLCLAL SLAGTGAAPP VQSRIIGGWD CTKNSQPWQA ALYHYSKFQC GGVLVHPEWV  60
   61 VTAAHCINDN YQLWLGRYNL FEHEDTAQFV QVRESFPHPE FNLSLLKNHT RLPEEDYSHD 120
  121 IMLLRLAEPA QITDAVRVLD LPTQEPQVGS TCYASGWGSI EPDKFIYPDD LQCVDLELLS 180
  181 NDICANAHSQ KVTEFMLCAG HLEGGKDTCV GDSGGPLICD GVLQGITSWG HVPCGSPNMP 240
  241 AVYTKVISHL EWIKETMTAN P

Type	Start	End	Confidence
Signal Peptide	1	23	0.93
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	261	0.99