YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ACKR4_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALELNQSAE YYYEENEMNY THDYSQYEVI CIKEEVRQFA KVFLPAFFTV AFVTGLAGNS  60
   61 VVVAIYAYYK KQRTKTDVYI LNLAVADLLL LITLPFWAVN AVHGWILGKM MCKVTSALYT 120
  121 VNFVSGMQFL ACISIDRYWA ITKAPSQSGA GRPCWIICCC VWMAAILLSI PQLVFYTVNQ 180
  181 NARCTPIFPH HLGTSLKASI QMLEIGIGFV VPFLIMGVCY ASTARALIKM PNIKKSRPLR 240
  241 VLLAVVVVFI VTQLPYNVVK FCQAIDAIYL LITSCDMSKR MDVAIQVTES IALFHSCLNP 300
  301 ILYVFMGASF KNYIMKVAKK YGSWRRQRQN VEEIPFDSEG PTEPTSSFTI

Type	Start	End	Confidence
Non-Cytoplasmic	1	45	0.95
Transmembrane Helix	46	69	0.90
Cytoplasmic	70	77	0.94
Transmembrane Helix	78	99	0.92
Non-Cytoplasmic	100	116	0.82
Transmembrane Helix	117	139	0.84
Cytoplasmic	140	152	0.86
Transmembrane Helix	153	173	0.91
Non-Cytoplasmic	174	199	0.92
Transmembrane Helix	200	224	0.83
Cytoplasmic	225	238	0.87
Transmembrane Helix	239	259	0.88
Non-Cytoplasmic	260	290	0.95
Transmembrane Helix	291	314	0.81
Cytoplasmic	315	350	0.92