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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TMPS6_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTTEVPQAA DGQGDAGDGE EAAEPEGKFK PPKNTKRKNR DYVRFTPLLL VLAALVSAGV  60
   61 MLWYFLGYKA EVTVSQVYSG SLRVLNRHFS QDLGRRESIA FRSESAKAQK MLQELVASTR 120
  121 LGTYYNSSSV YSFGEGPLTC FFWFILDIPE YQRLTLSPEV VRELLVDELL SNSSTLASYK 180
  181 TEYEVDPEGL VILEASVNDI VVLNSTLGCY RYSYVNPGQV LPLKGPDQQT TSCLWHLQGP 240
  241 EDLMIKVRLE WTRVDCRDRV AMYDAAGPLE KRLITSVYGC SRQEPVMEVL ASGSVMAVVW 300
  301 KKGMHSYYDP FLLSVKSVAF QDCQVNLTLE GRLDTQGFLR TPYYPSYYSP STHCSWHLTV 360
  361 PSLDYGLALW FDAYALRRQK YNRLCTQGQW MIQNRRLCGF RTLQPYAERI PMVASDGVTI 420
  421 NFTSQISLTG PGVQVYYSLY NQSDPCPGEF LCSVNGLCVP ACDGIKDCPN GLDERNCVCR 480
  481 AMFQCQEDST CISLPRVCDR QPDCLNGSDE EQCQEGVPCG TFTFQCEDRS CVKKPNPECD 540
  541 GQSDCRDGSD EQHCDCGLQG LSSRIVGGTV SSEGEWPWQA SLQIRGRHIC GGALIADRWV 600
  601 ITAAHCFQED SMASPKLWTV FLGKMRQNSR WPGEVSFKVS RLFLHPYHEE DSHDYDVALL 660
  661 QLDHPVVYSA TVRPVCLPAR SHFFEPGQHC WITGWGAQRE GGPVSNTLQK VDVQLVPQDL 720
  721 CSEAYRYQVS PRMLCAGYRK GKKDACQGDS GGPLVCREPS GRWFLAGLVS WGLGCGRPNF 780
  781 FGVYTRVTRV INWIQQVLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle