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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85079959
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLNRTRYL TCFYCGRKTS TPWNSSIRNF ECRNCDATNY LDGNGDITDP PVATEYEASP  60
   61 AKFATTRATS PTVGSSSASV FCNKCLANQD KLRAVLAQYL PDPDDSEYEE RCRNIYKFRR 120
  121 LQERLYPQMC AECEPRVQKK LGEAAYTAKT DVLLRMIERS NKQRQQVTGW SWLNVFDSLG 180
  181 RWLRTASLVL QLLWHLSIML MLFKAAILTR LGETPNPWAL RAVDTCFWFF NLLPSTDRLS 240
  241 GWNLTTAILS VWWNPRYPQL HRGFTKHITG FRAWYMYQAI LVFMRFWVRR LPILAGPEQA 300
  301 ELNMPAAAHV FWAGFAILVH LLAPRAIRID MAPLFGTTSK PSAPQGGSVS QPSKYRPTTA 360
  361 NTAAAATGPR RSGRAVKPSS QLLAARSSFS SSLPPAPAPA PAPAPAPVAA PAPTPDEKPD 420
  421 EIKVMVDLLD EIVNGPSSPA SPTPSIDHSP FFVPRVGRSN VPTTPGSPFS PTPRRFGTGA 480
  481 STGTGPSFSS LGPAANTRSA TAAYTQEMDW TPTQSQYRAF QTVGQRENQG FNEAPTDENK 540
  541 GPFWYRVPPA PTAPAQRLNN YLTKQPRIIA PRHTAPRPGT GIPSFGSTAL INTPQKQILG 600
  601 RINNDHMTMT MRRDAGEDTG IDPTPARVAF APPKFFVPPP QNDPRNSLSE MLGRSFSLSQ 660
  661 EEEEEQREAE REEAEKKSRG WLGGGLLTFR STPAKKDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle