YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7484726, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFPVVDTEY LKEIDKARRD LRALIALKNC APIMLRLAWH DAGTYDVSTK TGGPNGSIRN  60
   61 EEEFTHGANS GLKIAIDFCE EVKAKHPKIT YADLYQLAGV VAVEVTGGPT IDFVPGRKDS 120
  121 NICPREGRLP DAKRGAPHLR DIFYRMGLSD KDIVALSGGH TLGRAHPERS GFDGPWTNEP 180
  181 LKFDNSYFLE LLKGESEGLL KLPTDKALLD DPEFRKYVEL YAKDEDAFFR DYAESHKKLS 240
  241 ELGFTPTSAR SKVMVKDSTV LAQGAVGVAV AAAVVILSYF YEVRKRMK

Type	Start	End	Confidence
Non-Cytoplasmic	1	259	0.89
Transmembrane Helix	260	281	0.93
Cytoplasmic	282	288	0.81