YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148217\|gb\|AAA...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTGDSYKDV KFMLRIFIPT SNGKISRRRY IFSFILINFI FAFLIIFFND GEAGFLVIVS  60
   61 TIVLHYLVIN MNCQRLRDSG FIYIKTYVFG TLAVYIISII TMIAEDFACS GNGSMIFLIC 120
  121 YFSTFSMLML APTDSSKQ

Type	Start	End	Confidence
Cytoplasmic	1	29	0.96
Transmembrane Helix	30	48	0.95
Non-Cytoplasmic	49	52	0.90
Transmembrane Helix	53	73	0.89
Cytoplasmic	74	80	0.94
Transmembrane Helix	81	104	0.89
Non-Cytoplasmic	105	112	0.75
Transmembrane Helix	113	131	0.95
Cytoplasmic	132	138	0.82