YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1076621, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIMGGETKV FTLAEVSQHN NAKDCWLVIS GKVYDVTKFL DDHPGGDEVL LSATGKDATD  60
   61 DFEDVGHSSS ARAMLDEYYV GDIDSATIPT KTKYTPPNQP HYNQDKTSEF VVKLLQFLVP 120
  121 LIILGVAFGI RFYTKQSSA

Type	Start	End	Confidence
Cytoplasmic	1	113	0.64
Transmembrane Helix	114	133	0.86
Non-Cytoplasmic	134	139	0.67