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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|290590, gi|43257
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYPDPFDVI IIGGGHAGTE AAMAAARMGQ QTLLLTHNID TLGQMSCNPA IGGIGKGHLV  60
   61 KEVDALGGLM AKAIDQAGIQ FRILNASKGP AVRATRAQAD RVLYRQAVRT ALENQPNLMI 120
  121 FQQAVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS 180
  181 IPLSRRLREL PLRVGRLKTG TPPRIDARTI DFSVLAQQHG DNPMPVFSFM GNASQHPQQV 240
  241 PCYITHTNEK THDVIRSNLD RSPMYAGVIE GVGPRYCPSI EDKVMRFADR NQHQIFLEPE 300
  301 GLTSNEIYPN GISTSLPFDV QMQIVRSMQG MENAKIVRPG YAIEYDFFDP RDLKPTLESK 360
  361 FIQGLFFAGQ INGTTGYEEA AAQGLLAGLN AARLSADKEG WAPARSQAYL GVLVDDLCTL 420
  421 GTKEPYRMFT SRAEYRLMLR EDNADLRLTE IGRELGLVDD ERWARFNEKL ENIERERQRL 480
  481 KSTWVTPSAE AAAEVNAHLT APLSREASGE DLLRPEMTYE KLTTLTPFAP ALTDEQAAEQ 540
  541 VEIQVKYEGY IARQQDEIEK QLRNENTLLP ATLDYRQVSG LSNEVIAKLN DHKPASIGQA 600
  601 SRISGVTPAA ISILLVWLKK QGMLRRSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle