YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33863738, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAGPACSGP SHNLRDVPGA GINLSVPIRA VLAPHTFSST MDSITTAASV VAAGLAVGLG  60
   61 AIGPGIGQGT AAGGAVEGIA RQPEAEGKIR GTLLLSFAFM ESLTIYGLVV ALVLLFANPF 120
  121 AG

Type	Start	End	Confidence
Cytoplasmic	1	18	0.73
Transmembrane Helix	19	33	0.38
Non-Cytoplasmic	34	43	0.41
Transmembrane Helix	44	72	0.72
Cytoplasmic	73	92	0.53
Transmembrane Helix	93	117	0.84
Non-Cytoplasmic	118	122	0.54