YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33866570, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGFQSTLL LTVLLAIGLV FFLRAASKDR TTVVDVHSPR PALEVLSGLS DWLEQRGWSR  60
   61 DGGDADRQVL RFRGSVAASQ PLAVLLSVLA AIGGTCFGLV LRQLAPQLSW WPLLLILLGP 120
  121 AAGSVYSRRA ARTEALELQL LQEHNEAGIT VRLRAHRDEL IAIELELADS LQLSSDGSLL 180
  181 SSPI

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.59
Transmembrane Helix	7	26	0.65
Cytoplasmic	27	80	0.68
Transmembrane Helix	81	101	0.89
Non-Cytoplasmic	102	107	0.67
Transmembrane Helix	108	127	0.86
Cytoplasmic	128	184	0.75