YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|171849106, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTKRKPYVRP MTSTWWKKLP FYRFYMLREG TAVPAVWFSI ELIFGLFALK NGPEAWAGFV  60
   61 DFLQNPVIVI INLITLAAAL LHTKTWFELA PKAANIIVKD EKMGPEPIIK SLWAVTVVAT 120
  121 IVILFVALYW

Type	Start	End	Confidence
Cytoplasmic	1	23	0.94
Transmembrane Helix	24	48	0.81
Non-Cytoplasmic	49	65	0.85
Transmembrane Helix	66	87	0.89
Cytoplasmic	88	107	0.96
Transmembrane Helix	108	129	0.92
Non-Cytoplasmic	130	130	0.99