YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2126795, gi\|4...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPGIDKEKV VNIEERIPKI KEQRKQKANR RLITFILLFF TMMLIIIYLQ TPISKVSTVE  60
   61 IKGNKNVSKD QIISLSSIHK GQTEFWSLSK QKAAEKIEQN KLIKKAEISK QLPNKIAISI 120
  121 EEYKSIAFLQ KHNVYYSVLE NGTVLPEEVT PTDIGPTLNN WEEDEKLVQM AKQLNKLSDS 180
  181 VKKSISEINY TPQKSNPWLI RLYMNDGYIV TASLKTFGQK MNSYPAIVKE LPKGEKGIIH 240
  241 MEVATYFEPL KKTDESKKGD GN

Type	Start	End	Confidence
Cytoplasmic	1	30	0.97
Transmembrane Helix	31	49	0.95
Non-Cytoplasmic	50	262	0.99