YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62079237, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVISQRYPD IRIEGENYLP QPIYRHIASF LSVFKLVLIG LIIVGKDPFA FFGMQAPSIW  60
   61 QWGQENKVYA CMMVFFLSNM IENQCMSTGA FEITLNDVPV WSKLESGHLP SMQQLVQILD 120
  121 NEMKLNVHMD SIPHHRS

Type	Start	End	Confidence
Cytoplasmic	1	26	0.60
Transmembrane Helix	27	45	0.76
Non-Cytoplasmic	46	137	0.55