YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74218021, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.98
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLFVELVPV LLTAMSFLSP RGVRAIKADH MGSYGPAFYQ SYDASGQFTH EFDGEQIFSV  60
   61 DLKNEEVVWR LPEFGDFAHS DFQSGLMSIS MIKAHLDILV ERSNRTRAVS VPPRVTVLPK 120
  121 TRVELGKPNV LICIVDDIFP PVINVTWLRN SQPITKGVAQ TSFYSQPNHR FRKFHYLTFV 180
  181 PSAEDVYDCK VEHWGLDTPL LQHWEPQVLT PPPDTIETLI CGLGLVLGLM GCLLGTVLMI 240
  241 TGTRRPSIRR

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	218	0.99
Transmembrane Helix	219	241	0.93
Cytoplasmic	242	250	0.92