YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220902, gi\|207127
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTQELRTAKD SDDDDDVTVT VDRDRFMDEF FEQVEEIRGF IDKIAENVEE VKRKHSAILA  60
   61 SPNPDEKTKE ELEELMSDIK KTANKVRSKL KSIEQSIEQE EGLNRSSADL RIRKTQHSTL 120
  121 SRKFVEVMSE YNATQSDYRE RCKGRIQRQL EITGRTTTSE ELEDMLESGN PAIFASGIIM 180
  181 DSSISKQALS EIETRHSEII KLENSIRELH DMFMDMAMLV ESQGEMIDRI EYNVEHAVDY 240
  241 VERAVSDTKK AVKYQSKARR KKIMIIICCV ILGIIIASTI GGIFG

Type	Start	End	Confidence
Cytoplasmic	1	262	0.98
Transmembrane Helix	263	284	0.94
Non-Cytoplasmic	285	285	0.99