YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117558800, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.31
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELDELCLLD MLVYLEGFMA FVSIVGLRSV GSPYGRYSPQ WPGIRVPARP AWFIQELPSM  60
   61 AWPLYEYIRP AAARLGNLPN RVLLAMFLIH YVQRTLVFPV LIRGGKPTLL VTFVLAFLFC 120
  121 TFNGYVQSRY LSQFAVYAED WVTHPCFLTG FALWLVGMVI NIHSDHILRN LRKPGETGYK 180
  181 IPRGGLFEYV SAANYFGELV EWCGFALASW SLQGVVFALF TLSTLLTRAK QHHQWYHEKF 240
  241 EDYPKSRKIL IPFVL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.65
Transmembrane Helix	12	31	0.79
Non-Cytoplasmic	32	76	0.52
Transmembrane Helix	77	92	0.63
Cytoplasmic	93	106	0.45
Transmembrane Helix	107	126	0.91
Non-Cytoplasmic	127	140	0.54
Transmembrane Helix	141	163	0.87
Cytoplasmic	164	180	0.53
Transmembrane Helix	181	197	0.31
Non-Cytoplasmic	198	204	0.55
Transmembrane Helix	205	226	0.81
Cytoplasmic	227	255	0.79